Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 TREHP1-201ENST00000531328 465 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.8■□□□□ 0.28
TM4SF4P48230 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.8■□□□□ 0.28
TM4SF4P48230 AC124068.2-201ENST00000569473 1109 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.8■□□□□ 0.28
TM4SF4P48230 SIGLEC22P-201ENST00000599104 714 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 AC021016.3-201ENST00000608367 477 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 MIR6816-201ENST00000620368 66 ntBASIC16.8■□□□□ 0.28
TM4SF4P48230 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.8■□□□□ 0.28
TM4SF4P48230 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.8■□□□□ 0.28
TM4SF4P48230 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TM4SF4P48230 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TM4SF4P48230 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.8■□□□□ 0.28
TM4SF4P48230 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TM4SF4P48230 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TM4SF4P48230 AC009093.10-201ENST00000641956 1442 ntBASIC16.79■□□□□ 0.28
TM4SF4P48230 AL603832.2-201ENST00000566195 2125 ntBASIC16.79■□□□□ 0.28
TM4SF4P48230 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 AC105250.1-201ENST00000509378 2057 ntBASIC16.79■□□□□ 0.28
TM4SF4P48230 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
TM4SF4P48230 PCDHA12-202ENST00000613593 2588 ntBASIC16.79■□□□□ 0.28
TM4SF4P48230 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.79■□□□□ 0.28
TM4SF4P48230 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC16.79■□□□□ 0.28
TM4SF4P48230 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.79■□□□□ 0.28
TM4SF4P48230 VENTXP4-201ENST00000449029 958 ntBASIC16.79■□□□□ 0.28
TM4SF4P48230 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.79■□□□□ 0.28
TM4SF4P48230 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.79■□□□□ 0.28
TM4SF4P48230 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 AC068831.5-201ENST00000557387 328 ntBASIC16.79■□□□□ 0.28
TM4SF4P48230 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.79■□□□□ 0.28
TM4SF4P48230 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.79■□□□□ 0.28
TM4SF4P48230 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TM4SF4P48230 AP003680.1-201ENST00000598970 3660 ntBASIC16.79■□□□□ 0.28
TM4SF4P48230 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.79■□□□□ 0.28
TM4SF4P48230 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.79■□□□□ 0.28
TM4SF4P48230 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
TM4SF4P48230 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TM4SF4P48230 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.79■□□□□ 0.28
TM4SF4P48230 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.78■□□□□ 0.28
TM4SF4P48230 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.78■□□□□ 0.28
TM4SF4P48230 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TM4SF4P48230 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TM4SF4P48230 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.78■□□□□ 0.28
TM4SF4P48230 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.78■□□□□ 0.28
TM4SF4P48230 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.78■□□□□ 0.28
TM4SF4P48230 AP002353.1-201ENST00000528257 1599 ntBASIC16.78■□□□□ 0.28
TM4SF4P48230 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.78■□□□□ 0.28
TM4SF4P48230 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.78■□□□□ 0.28
TM4SF4P48230 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.78■□□□□ 0.28
TM4SF4P48230 RN7SL277P-201ENST00000481521 288 ntBASIC16.78■□□□□ 0.28
TM4SF4P48230 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
TM4SF4P48230 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.78■□□□□ 0.28
TM4SF4P48230 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.78■□□□□ 0.28
TM4SF4P48230 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.78■□□□□ 0.28
TM4SF4P48230 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TM4SF4P48230 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms