Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 AC090616.6-203ENST00000579186 1945 ntBASIC13.91□□□□□ -0.18
RFC3P40938 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.91□□□□□ -0.18
RFC3P40938 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.91□□□□□ -0.18
RFC3P40938 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 TUBB1P2-201ENST00000422712 1306 ntBASIC13.9□□□□□ -0.18
RFC3P40938 TUBB1P1-201ENST00000503144 1300 ntBASIC13.9□□□□□ -0.18
RFC3P40938 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.9□□□□□ -0.18
RFC3P40938 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.9□□□□□ -0.18
RFC3P40938 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RFC3P40938 AL122018.1-201ENST00000446607 2310 ntBASIC13.9□□□□□ -0.18
RFC3P40938 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RFC3P40938 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 RNA5SP486-201ENST00000515961 83 ntBASIC13.9□□□□□ -0.18
RFC3P40938 AC023310.1-201ENST00000554836 735 ntBASIC13.9□□□□□ -0.18
RFC3P40938 SAMD11P1-201ENST00000571429 661 ntBASIC13.9□□□□□ -0.18
RFC3P40938 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.9□□□□□ -0.18
RFC3P40938 AC008687.7-202ENST00000637404 953 ntBASIC13.9□□□□□ -0.18
RFC3P40938 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 REXO1L5P-201ENST00000622260 2098 ntBASIC13.9□□□□□ -0.18
RFC3P40938 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.9□□□□□ -0.18
RFC3P40938 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.9□□□□□ -0.18
RFC3P40938 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RFC3P40938 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.9□□□□□ -0.18
RFC3P40938 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RFC3P40938 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RFC3P40938 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RFC3P40938 AL354989.2-201ENST00000435838 1540 ntBASIC13.9□□□□□ -0.19
RFC3P40938 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RFC3P40938 AHCYP2-201ENST00000430630 1300 ntBASIC13.9□□□□□ -0.19
RFC3P40938 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.9□□□□□ -0.19
RFC3P40938 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 AC126755.1-201ENST00000525846 6405 ntBASIC13.89□□□□□ -0.19
RFC3P40938 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 AC006001.1-201ENST00000325130 474 ntBASIC13.89□□□□□ -0.19
RFC3P40938 TPM3P8-201ENST00000330554 643 ntBASIC13.89□□□□□ -0.19
RFC3P40938 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RFC3P40938 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RFC3P40938 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 AL139094.1-201ENST00000405549 1188 ntBASIC13.89□□□□□ -0.19
RFC3P40938 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.89□□□□□ -0.19
RFC3P40938 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.89□□□□□ -0.19
RFC3P40938 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RFC3P40938 FAM8A2P-201ENST00000528813 1142 ntBASIC13.89□□□□□ -0.19
RFC3P40938 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RFC3P40938 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.89□□□□□ -0.19
RFC3P40938 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms