Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.03■□□□□ -0
HMGCLP35914 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.03■□□□□ -0
HMGCLP35914 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.03■□□□□ -0
HMGCLP35914 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.03■□□□□ -0
HMGCLP35914 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.03■□□□□ -0
HMGCLP35914 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
HMGCLP35914 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HMGCLP35914 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HMGCLP35914 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 CLUHP2-201ENST00000426660 1303 ntBASIC15.02■□□□□ -0
HMGCLP35914 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.02■□□□□ -0
HMGCLP35914 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.02■□□□□ -0
HMGCLP35914 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HMGCLP35914 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HMGCLP35914 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGCLP35914 ARSEP1-201ENST00000420443 635 ntBASIC15.02■□□□□ -0
HMGCLP35914 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.02■□□□□ -0
HMGCLP35914 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.02■□□□□ -0
HMGCLP35914 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.02■□□□□ -0
HMGCLP35914 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.02■□□□□ -0
HMGCLP35914 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
HMGCLP35914 KRT90P-201ENST00000549264 1064 ntBASIC15.02■□□□□ -0
HMGCLP35914 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.02■□□□□ -0
HMGCLP35914 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.02■□□□□ -0
HMGCLP35914 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.02■□□□□ -0
HMGCLP35914 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.02■□□□□ -0
HMGCLP35914 AC244669.2-201ENST00000612320 853 ntBASIC15.02■□□□□ -0
HMGCLP35914 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.02■□□□□ -0
HMGCLP35914 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.02■□□□□ -0
HMGCLP35914 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HMGCLP35914 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCLP35914 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCLP35914 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
HMGCLP35914 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.02□□□□□ -0.01
HMGCLP35914 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCLP35914 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCLP35914 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.02□□□□□ -0.01
HMGCLP35914 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
HMGCLP35914 AC099063.4-201ENST00000641099 1602 ntBASIC15.02□□□□□ -0.01
HMGCLP35914 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.02□□□□□ -0.01
HMGCLP35914 C8orf49-201ENST00000525043 1968 ntBASIC15.02□□□□□ -0.01
HMGCLP35914 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
HMGCLP35914 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCLP35914 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCLP35914 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.02□□□□□ -0.01
HMGCLP35914 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGCLP35914 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 AC003102.2-201ENST00000589195 1469 ntBASIC15.01□□□□□ -0.01
HMGCLP35914 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
HMGCLP35914 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGCLP35914 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGCLP35914 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGCLP35914 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCLP35914 AC007969.1-201ENST00000433675 447 ntBASIC15.01□□□□□ -0.01
HMGCLP35914 FTLP10-202ENST00000505798 471 ntBASIC15.01□□□□□ -0.01
HMGCLP35914 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGCLP35914 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.01□□□□□ -0.01
HMGCLP35914 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.01□□□□□ -0.01
HMGCLP35914 AP000812.2-201ENST00000538934 718 ntBASIC15.01□□□□□ -0.01
HMGCLP35914 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGCLP35914 AC138466.3-201ENST00000619983 221 ntBASIC15.01□□□□□ -0.01
HMGCLP35914 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGCLP35914 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGCLP35914 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGCLP35914 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
HMGCLP35914 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGCLP35914 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGCLP35914 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms