Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.55□□□□□ -0.08
PTX3P26022 AP001582.1-201ENST00000525856 295 ntBASIC14.55□□□□□ -0.08
PTX3P26022 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.55□□□□□ -0.08
PTX3P26022 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
PTX3P26022 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.55□□□□□ -0.08
PTX3P26022 SPDYE22P-201ENST00000582158 798 ntBASIC14.55□□□□□ -0.08
PTX3P26022 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.55□□□□□ -0.08
PTX3P26022 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTX3P26022 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PTX3P26022 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.54□□□□□ -0.08
PTX3P26022 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.54□□□□□ -0.08
PTX3P26022 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PTX3P26022 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PTX3P26022 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PTX3P26022 CICP14-201ENST00000629111 2732 ntBASIC14.54□□□□□ -0.08
PTX3P26022 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 TERF1P3-201ENST00000505638 1227 ntBASIC14.54□□□□□ -0.08
PTX3P26022 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PTX3P26022 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.54□□□□□ -0.08
PTX3P26022 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.54□□□□□ -0.08
PTX3P26022 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.54□□□□□ -0.08
PTX3P26022 AL137783.1-201ENST00000623494 1896 ntBASIC14.54□□□□□ -0.08
PTX3P26022 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.54□□□□□ -0.08
PTX3P26022 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
PTX3P26022 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
PTX3P26022 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTX3P26022 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.53□□□□□ -0.08
PTX3P26022 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PTX3P26022 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PTX3P26022 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.53□□□□□ -0.08
PTX3P26022 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PTX3P26022 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.53□□□□□ -0.08
PTX3P26022 ACKR1-201ENST00000368121 1240 ntBASIC14.53□□□□□ -0.08
PTX3P26022 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PTX3P26022 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.53□□□□□ -0.08
PTX3P26022 ELK1P1-201ENST00000485699 580 ntBASIC14.53□□□□□ -0.08
PTX3P26022 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.53□□□□□ -0.08
PTX3P26022 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.53□□□□□ -0.08
PTX3P26022 AC140912.1-201ENST00000577171 1054 ntBASIC14.53□□□□□ -0.08
PTX3P26022 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PTX3P26022 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.53□□□□□ -0.08
PTX3P26022 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.53□□□□□ -0.08
PTX3P26022 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTX3P26022 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.53□□□□□ -0.08
PTX3P26022 AC008494.3-201ENST00000606615 944 ntBASIC14.53□□□□□ -0.08
PTX3P26022 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.53□□□□□ -0.08
PTX3P26022 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PTX3P26022 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms