Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.79□□□□□ -0.36
COL8A2P25067 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.79□□□□□ -0.36
COL8A2P25067 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.79□□□□□ -0.36
COL8A2P25067 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
COL8A2P25067 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
COL8A2P25067 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
COL8A2P25067 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.78□□□□□ -0.36
COL8A2P25067 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 MIR326-201ENST00000362220 95 ntBASIC12.78□□□□□ -0.36
COL8A2P25067 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.78□□□□□ -0.36
COL8A2P25067 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
COL8A2P25067 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.78□□□□□ -0.36
COL8A2P25067 GHSR-202ENST00000427970 912 ntBASIC12.78□□□□□ -0.36
COL8A2P25067 FAM8A4P-201ENST00000435433 1213 ntBASIC12.78□□□□□ -0.36
COL8A2P25067 AC108725.1-201ENST00000495472 409 ntBASIC12.78□□□□□ -0.36
COL8A2P25067 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.78□□□□□ -0.36
COL8A2P25067 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.78□□□□□ -0.36
COL8A2P25067 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
COL8A2P25067 AC004466.1-201ENST00000599515 1080 ntBASIC12.78□□□□□ -0.36
COL8A2P25067 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
COL8A2P25067 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
COL8A2P25067 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.78□□□□□ -0.36
COL8A2P25067 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.78□□□□□ -0.36
COL8A2P25067 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
COL8A2P25067 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.78□□□□□ -0.36
COL8A2P25067 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COL8A2P25067 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.77□□□□□ -0.36
COL8A2P25067 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COL8A2P25067 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COL8A2P25067 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.36
COL8A2P25067 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COL8A2P25067 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COL8A2P25067 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.77□□□□□ -0.36
COL8A2P25067 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.77□□□□□ -0.36
COL8A2P25067 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.77□□□□□ -0.36
COL8A2P25067 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.77□□□□□ -0.36
COL8A2P25067 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.77□□□□□ -0.36
COL8A2P25067 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COL8A2P25067 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COL8A2P25067 AC023908.3-201ENST00000564211 3047 ntBASIC12.77□□□□□ -0.36
COL8A2P25067 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.77□□□□□ -0.37
COL8A2P25067 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COL8A2P25067 C18orf15-201ENST00000623680 2534 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms