Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 KRT8P35-201ENST00000483942 1338 ntBASIC13□□□□□ -0.33
TNFSF4P23510 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 AC104457.1-201ENST00000401024 814 ntBASIC13□□□□□ -0.33
TNFSF4P23510 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 AC012441.1-201ENST00000446669 685 ntBASIC13□□□□□ -0.33
TNFSF4P23510 AC093433.1-201ENST00000458048 571 ntBASIC13□□□□□ -0.33
TNFSF4P23510 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13□□□□□ -0.33
TNFSF4P23510 AC022137.2-201ENST00000503482 481 ntBASIC13□□□□□ -0.33
TNFSF4P23510 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13□□□□□ -0.33
TNFSF4P23510 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13□□□□□ -0.33
TNFSF4P23510 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13□□□□□ -0.33
TNFSF4P23510 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TNFSF4P23510 AC233724.13-201ENST00000598383 410 ntBASIC13□□□□□ -0.33
TNFSF4P23510 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13□□□□□ -0.33
TNFSF4P23510 IGHV3-72-202ENST00000621503 303 ntBASIC13□□□□□ -0.33
TNFSF4P23510 AL603764.1-201ENST00000636452 321 ntBASIC13□□□□□ -0.33
TNFSF4P23510 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 DKFZP434A062-201ENST00000573103 5021 ntBASIC13□□□□□ -0.33
TNFSF4P23510 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.99□□□□□ -0.33
TNFSF4P23510 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.99□□□□□ -0.33
TNFSF4P23510 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TNFSF4P23510 AC005229.1-201ENST00000392885 409 ntBASIC12.99□□□□□ -0.33
TNFSF4P23510 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 AL139094.1-201ENST00000405549 1188 ntBASIC12.99□□□□□ -0.33
TNFSF4P23510 KLF2P2-201ENST00000416807 1039 ntBASIC12.99□□□□□ -0.33
TNFSF4P23510 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.99□□□□□ -0.33
TNFSF4P23510 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 C2orf27AP3-201ENST00000434123 579 ntBASIC12.99□□□□□ -0.33
TNFSF4P23510 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.99□□□□□ -0.33
TNFSF4P23510 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.99□□□□□ -0.33
TNFSF4P23510 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TNFSF4P23510 AC022616.1-201ENST00000518688 554 ntBASIC12.99□□□□□ -0.33
TNFSF4P23510 SLC25A47P1-201ENST00000531577 414 ntBASIC12.99□□□□□ -0.33
TNFSF4P23510 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.99□□□□□ -0.33
TNFSF4P23510 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TNFSF4P23510 AL354718.3-201ENST00000616414 581 ntBASIC12.99□□□□□ -0.33
TNFSF4P23510 CR382287.1-201ENST00000623954 586 ntBASIC12.99□□□□□ -0.33
TNFSF4P23510 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.99□□□□□ -0.33
TNFSF4P23510 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TNFSF4P23510 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.98□□□□□ -0.33
TNFSF4P23510 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TNFSF4P23510 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TNFSF4P23510 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.98□□□□□ -0.33
TNFSF4P23510 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TNFSF4P23510 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TNFSF4P23510 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms