Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 PCDHA3-202ENST00000532566 4594 ntBASIC14.92□□□□□ -0.02
CDH3P22223 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 ACTG1P3-201ENST00000431775 1114 ntBASIC14.92□□□□□ -0.02
CDH3P22223 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 HILS1-202ENST00000545329 423 ntBASIC14.92□□□□□ -0.02
CDH3P22223 PTP4A1P2-201ENST00000546033 454 ntBASIC14.92□□□□□ -0.02
CDH3P22223 MIR5189-201ENST00000577370 114 ntBASIC14.92□□□□□ -0.02
CDH3P22223 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH3P22223 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.92□□□□□ -0.02
CDH3P22223 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 AC041040.2-201ENST00000622926 2899 ntBASIC14.92□□□□□ -0.02
CDH3P22223 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH3P22223 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH3P22223 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH3P22223 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CDH3P22223 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDH3P22223 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH3P22223 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDH3P22223 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH3P22223 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH3P22223 KRT43P-201ENST00000434019 910 ntBASIC14.91□□□□□ -0.02
CDH3P22223 AC234783.1-201ENST00000441761 496 ntBASIC14.91□□□□□ -0.02
CDH3P22223 ATP5G2P4-201ENST00000442175 420 ntBASIC14.91□□□□□ -0.02
CDH3P22223 IGHV3-71-201ENST00000523324 359 ntBASIC14.91□□□□□ -0.02
CDH3P22223 AP001582.1-201ENST00000525856 295 ntBASIC14.91□□□□□ -0.02
CDH3P22223 AC106886.1-201ENST00000568660 600 ntBASIC14.91□□□□□ -0.02
CDH3P22223 AC009486.1-201ENST00000569860 813 ntBASIC14.91□□□□□ -0.02
CDH3P22223 AC025181.2-201ENST00000606994 802 ntBASIC14.91□□□□□ -0.02
CDH3P22223 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH3P22223 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH3P22223 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH3P22223 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH3P22223 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms