Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AL360270.3-201ENST00000609118 1348 ntBASIC14.11□□□□□ -0.15
TNFRSF1BP20333 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TNFRSF1BP20333 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 AC125807.1-201ENST00000483097 614 ntBASIC14.1□□□□□ -0.15
TNFRSF1BP20333 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 HLA-J-203ENST00000494367 1087 ntBASIC14.1□□□□□ -0.15
TNFRSF1BP20333 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 SNHG9-202ENST00000564014 471 ntBASIC14.1□□□□□ -0.15
TNFRSF1BP20333 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 AC000095.1-201ENST00000603208 874 ntBASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 AC152010.1-201ENST00000415779 2006 ntBASIC14.1□□□□□ -0.15
TNFRSF1BP20333 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 TUBB3P1-201ENST00000405796 1332 ntBASIC14.1□□□□□ -0.15
TNFRSF1BP20333 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFRSF1BP20333 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AC015802.1-201ENST00000588104 1449 ntBASIC14.09□□□□□ -0.15
TNFRSF1BP20333 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AP006288.1-201ENST00000446065 395 ntBASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AC027369.6-201ENST00000525520 931 ntBASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AL844908.2-201ENST00000609461 460 ntBASIC14.09□□□□□ -0.15
TNFRSF1BP20333 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms