Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 NUDT4P2-201ENST00000578341 546 ntBASIC16.92■□□□□ 0.3
PTPRFP10586 RN7SL665P-201ENST00000578793 300 ntBASIC16.92■□□□□ 0.3
PTPRFP10586 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPRFP10586 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPRFP10586 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPRFP10586 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPRFP10586 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPRFP10586 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 AC092135.3-201ENST00000624151 1846 ntBASIC16.91■□□□□ 0.3
PTPRFP10586 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
PTPRFP10586 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTPRFP10586 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPRFP10586 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPRFP10586 CR383656.3-201ENST00000551315 183 ntBASIC16.91■□□□□ 0.3
PTPRFP10586 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPRFP10586 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPRFP10586 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.91■□□□□ 0.3
PTPRFP10586 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPRFP10586 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPRFP10586 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPRFP10586 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PTPRFP10586 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTPRFP10586 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPRFP10586 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 PPT1-215ENST00000641471 2368 ntBASIC16.9■□□□□ 0.3
PTPRFP10586 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
PTPRFP10586 AC139712.1-201ENST00000378256 1875 ntBASIC16.9■□□□□ 0.3
PTPRFP10586 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 AC093752.3-201ENST00000567343 901 ntBASIC16.9■□□□□ 0.3
PTPRFP10586 AC087392.5-201ENST00000612517 489 ntBASIC16.9■□□□□ 0.3
PTPRFP10586 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPRFP10586 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PTPRFP10586 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTPRFP10586 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPRFP10586 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PTPRFP10586 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTPRFP10586 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 LYPLA2P1-203ENST00000447689 696 ntBASIC16.9■□□□□ 0.3
PTPRFP10586 KRT8P1-201ENST00000557533 1207 ntBASIC16.9■□□□□ 0.3
PTPRFP10586 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPRFP10586 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPRFP10586 AC103810.10-201ENST00000606504 343 ntBASIC16.9■□□□□ 0.3
PTPRFP10586 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PTPRFP10586 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPRFP10586 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTPRFP10586 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPRFP10586 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPRFP10586 CICP23-201ENST00000605013 2741 ntBASIC16.89■□□□□ 0.29
PTPRFP10586 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPRFP10586 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPRFP10586 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPRFP10586 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPRFP10586 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.89■□□□□ 0.29
PTPRFP10586 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPRFP10586 AC004837.1-201ENST00000446267 564 ntBASIC16.89■□□□□ 0.29
PTPRFP10586 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.89■□□□□ 0.29
PTPRFP10586 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPRFP10586 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPRFP10586 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPRFP10586 MIR2392-201ENST00000584881 84 ntBASIC16.89■□□□□ 0.29
PTPRFP10586 MRPL37P1-201ENST00000592451 1337 ntBASIC16.89■□□□□ 0.29
PTPRFP10586 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPRFP10586 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPRFP10586 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPRFP10586 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPRFP10586 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPRFP10586 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPRFP10586 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms