Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLTAP09496 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLTAP09496 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 AC091951.1-201ENST00000512854 2465 ntBASIC16.6■□□□□ 0.25
CLTAP09496 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.6■□□□□ 0.25
CLTAP09496 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLTAP09496 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLTAP09496 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLTAP09496 PDIA3P1-201ENST00000471856 1510 ntBASIC16.6■□□□□ 0.25
CLTAP09496 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLTAP09496 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.59■□□□□ 0.25
CLTAP09496 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 C2orf27AP3-201ENST00000434123 579 ntBASIC16.59■□□□□ 0.25
CLTAP09496 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.59■□□□□ 0.25
CLTAP09496 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 AC022210.1-201ENST00000449856 793 ntBASIC16.59■□□□□ 0.25
CLTAP09496 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CLTAP09496 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 FTH1P14-201ENST00000482930 551 ntBASIC16.59■□□□□ 0.25
CLTAP09496 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.59■□□□□ 0.25
CLTAP09496 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.59■□□□□ 0.25
CLTAP09496 AC025279.2-201ENST00000569730 653 ntBASIC16.59■□□□□ 0.25
CLTAP09496 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.59■□□□□ 0.25
CLTAP09496 AL354718.3-201ENST00000616414 581 ntBASIC16.59■□□□□ 0.25
CLTAP09496 CR382287.1-201ENST00000623954 586 ntBASIC16.59■□□□□ 0.25
CLTAP09496 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.59■□□□□ 0.25
CLTAP09496 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 AL360270.3-201ENST00000609118 1348 ntBASIC16.59■□□□□ 0.25
CLTAP09496 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 LRRC59-203ENST00000576448 1531 ntBASIC16.59■□□□□ 0.25
CLTAP09496 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CLTAP09496 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.59■□□□□ 0.25
CLTAP09496 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 AC139749.1-202ENST00000617529 3139 ntBASIC16.59■□□□□ 0.25
CLTAP09496 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLTAP09496 REXO1L4P-201ENST00000605109 1937 ntBASIC16.58■□□□□ 0.25
CLTAP09496 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLTAP09496 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLTAP09496 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLTAP09496 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLTAP09496 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLTAP09496 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLTAP09496 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLTAP09496 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLTAP09496 AC023908.3-201ENST00000564211 3047 ntBASIC16.58■□□□□ 0.24
CLTAP09496 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.58■□□□□ 0.24
CLTAP09496 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.58■□□□□ 0.24
CLTAP09496 HLA-K-203ENST00000430151 1046 ntBASIC16.58■□□□□ 0.24
CLTAP09496 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLTAP09496 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 AC022616.1-201ENST00000518688 554 ntBASIC16.58■□□□□ 0.24
CLTAP09496 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLTAP09496 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLTAP09496 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLTAP09496 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CLTAP09496 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.58■□□□□ 0.24
CLTAP09496 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLTAP09496 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CLTAP09496 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.58■□□□□ 0.24
CLTAP09496 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLTAP09496 AL359881.2-201ENST00000602973 570 ntBASIC16.58■□□□□ 0.24
CLTAP09496 MIR6805-201ENST00000615055 62 ntBASIC16.58■□□□□ 0.24
CLTAP09496 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLTAP09496 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLTAP09496 AL138709.1-201ENST00000614840 1693 ntBASIC16.58■□□□□ 0.24
CLTAP09496 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms