Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.17■□□□□ 0.02
MMP2P08253 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MMP2P08253 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.17■□□□□ 0.02
MMP2P08253 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.16■□□□□ 0.02
MMP2P08253 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 SALL4P5-201ENST00000419001 1760 ntBASIC15.16■□□□□ 0.02
MMP2P08253 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 TLE1P1-201ENST00000422965 589 ntBASIC15.16■□□□□ 0.02
MMP2P08253 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 RNA5SP486-201ENST00000515961 83 ntBASIC15.16■□□□□ 0.02
MMP2P08253 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.16■□□□□ 0.02
MMP2P08253 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.16■□□□□ 0.02
MMP2P08253 AC078819.1-201ENST00000547454 765 ntBASIC15.16■□□□□ 0.02
MMP2P08253 AC012085.1-201ENST00000548270 765 ntBASIC15.16■□□□□ 0.02
MMP2P08253 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.16■□□□□ 0.02
MMP2P08253 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.16■□□□□ 0.02
MMP2P08253 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MMP2P08253 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 AC020910.5-201ENST00000623668 1865 ntBASIC15.16■□□□□ 0.02
MMP2P08253 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.16■□□□□ 0.02
MMP2P08253 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.16■□□□□ 0.02
MMP2P08253 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.16■□□□□ 0.02
MMP2P08253 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.16■□□□□ 0.02
MMP2P08253 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MMP2P08253 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.16■□□□□ 0.02
MMP2P08253 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MMP2P08253 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 AC007292.2-201ENST00000593524 1812 ntBASIC15.15■□□□□ 0.02
MMP2P08253 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.15■□□□□ 0.02
MMP2P08253 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.15■□□□□ 0.02
MMP2P08253 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.15■□□□□ 0.02
MMP2P08253 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.15■□□□□ 0.02
MMP2P08253 TPM3P8-201ENST00000330554 643 ntBASIC15.15■□□□□ 0.02
MMP2P08253 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.15■□□□□ 0.02
MMP2P08253 AC112492.5-201ENST00000421897 457 ntBASIC15.15■□□□□ 0.02
MMP2P08253 C2orf27AP3-201ENST00000434123 579 ntBASIC15.15■□□□□ 0.02
MMP2P08253 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 AC106820.3-201ENST00000561653 397 ntBASIC15.15■□□□□ 0.02
MMP2P08253 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MMP2P08253 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.15■□□□□ 0.02
MMP2P08253 AL354718.3-201ENST00000616414 581 ntBASIC15.15■□□□□ 0.02
MMP2P08253 AL162274.1-201ENST00000617191 1098 ntBASIC15.15■□□□□ 0.02
MMP2P08253 CR382287.1-201ENST00000623954 586 ntBASIC15.15■□□□□ 0.02
MMP2P08253 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms