Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 RN7SL510P-201ENST00000581311 263 ntBASIC11.45□□□□□ -0.58
HLA-DQA1P01909 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 TCAM1P-207ENST00000485295 1537 ntBASIC11.45□□□□□ -0.58
HLA-DQA1P01909 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DQA1P01909 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 INE2-201ENST00000630399 1874 ntBASIC11.44□□□□□ -0.58
HLA-DQA1P01909 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 PMS2P7-201ENST00000506558 1336 ntBASIC11.44□□□□□ -0.58
HLA-DQA1P01909 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 PNMT-203ENST00000581428 677 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 MIR4515-201ENST00000584082 81 ntBASIC11.44□□□□□ -0.58
HLA-DQA1P01909 TBCB-205ENST00000585746 875 ntTSL 3 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 AC006557.2-201ENST00000592985 1240 ntBASIC11.44□□□□□ -0.58
HLA-DQA1P01909 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 MIR1199-201ENST00000621445 119 ntBASIC11.44□□□□□ -0.58
HLA-DQA1P01909 AC004706.3-202ENST00000621574 984 ntBASIC11.44□□□□□ -0.58
HLA-DQA1P01909 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms