Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 FO393414.2-201ENST00000405153 598 ntBASIC13.4□□□□□ -0.26
KDM4BO94953 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.4□□□□□ -0.26
KDM4BO94953 SPDYE17-201ENST00000412399 783 ntBASIC13.4□□□□□ -0.26
KDM4BO94953 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 AC093520.2-201ENST00000561830 333 ntBASIC13.4□□□□□ -0.26
KDM4BO94953 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.4□□□□□ -0.26
KDM4BO94953 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.4□□□□□ -0.26
KDM4BO94953 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 WASH3P-207ENST00000560956 1394 ntBASIC13.4□□□□□ -0.26
KDM4BO94953 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 FO538757.1-201ENST00000623083 1397 ntBASIC13.4□□□□□ -0.26
KDM4BO94953 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
KDM4BO94953 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.4□□□□□ -0.26
KDM4BO94953 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.4□□□□□ -0.26
KDM4BO94953 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
KDM4BO94953 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
KDM4BO94953 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
KDM4BO94953 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
KDM4BO94953 AC027601.5-201ENST00000624065 2482 ntBASIC13.39□□□□□ -0.27
KDM4BO94953 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
KDM4BO94953 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
KDM4BO94953 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.39□□□□□ -0.27
KDM4BO94953 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
KDM4BO94953 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
KDM4BO94953 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
KDM4BO94953 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
KDM4BO94953 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.39□□□□□ -0.27
KDM4BO94953 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
KDM4BO94953 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.39□□□□□ -0.27
KDM4BO94953 GPS2P2-201ENST00000430745 888 ntBASIC13.39□□□□□ -0.27
KDM4BO94953 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.39□□□□□ -0.27
KDM4BO94953 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.39□□□□□ -0.27
KDM4BO94953 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.39□□□□□ -0.27
KDM4BO94953 AC007967.4-201ENST00000614700 386 ntBASIC13.39□□□□□ -0.27
KDM4BO94953 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 AL607033.1-201ENST00000623900 1599 ntBASIC13.39□□□□□ -0.27
KDM4BO94953 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
KDM4BO94953 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KDM4BO94953 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
KDM4BO94953 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms