Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTNND1O60716 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.56■□□□□ 0.4
CTNND1O60716 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 RN7SKP214-201ENST00000364208 315 ntBASIC17.56■□□□□ 0.4
CTNND1O60716 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CTNND1O60716 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.56■□□□□ 0.4
CTNND1O60716 FTLP1-201ENST00000449155 526 ntBASIC17.56■□□□□ 0.4
CTNND1O60716 EEF1DP6-201ENST00000449232 372 ntBASIC17.56■□□□□ 0.4
CTNND1O60716 HLA-J-204ENST00000495278 958 ntBASIC17.56■□□□□ 0.4
CTNND1O60716 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.56■□□□□ 0.4
CTNND1O60716 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CTNND1O60716 AL133499.1-201ENST00000596207 608 ntBASIC17.56■□□□□ 0.4
CTNND1O60716 AL353726.2-201ENST00000623259 884 ntBASIC17.56■□□□□ 0.4
CTNND1O60716 AL359258.3-201ENST00000622910 2331 ntBASIC17.56■□□□□ 0.4
CTNND1O60716 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CTNND1O60716 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.56■□□□□ 0.4
CTNND1O60716 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CTNND1O60716 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.56■□□□□ 0.4
CTNND1O60716 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNND1O60716 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CTNND1O60716 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNND1O60716 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNND1O60716 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 AC012441.2-201ENST00000444843 739 ntBASIC17.55■□□□□ 0.4
CTNND1O60716 AL596276.2-201ENST00000447525 331 ntBASIC17.55■□□□□ 0.4
CTNND1O60716 RPS2P36-201ENST00000456516 831 ntBASIC17.55■□□□□ 0.4
CTNND1O60716 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNND1O60716 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.55■□□□□ 0.4
CTNND1O60716 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNND1O60716 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNND1O60716 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CTNND1O60716 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNND1O60716 AC006058.4-201ENST00000624016 1670 ntBASIC17.55■□□□□ 0.4
CTNND1O60716 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.55■□□□□ 0.4
CTNND1O60716 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.55■□□□□ 0.4
CTNND1O60716 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTNND1O60716 AC092850.2-201ENST00000623821 2697 ntBASIC17.55■□□□□ 0.4
CTNND1O60716 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.54■□□□□ 0.4
CTNND1O60716 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTNND1O60716 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.54■□□□□ 0.4
CTNND1O60716 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.54■□□□□ 0.4
CTNND1O60716 VDAC1P1-201ENST00000439229 848 ntBASIC17.54■□□□□ 0.4
CTNND1O60716 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.54■□□□□ 0.4
CTNND1O60716 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.54■□□□□ 0.4
CTNND1O60716 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.54■□□□□ 0.4
CTNND1O60716 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms