Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCA5O60264 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.65■□□□□ 0.58
SMARCA5O60264 AC027307.3-201ENST00000594262 1100 ntBASIC18.65■□□□□ 0.58
SMARCA5O60264 AC008735.3-201ENST00000596646 500 ntBASIC18.65■□□□□ 0.58
SMARCA5O60264 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCA5O60264 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.65■□□□□ 0.58
SMARCA5O60264 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMARCA5O60264 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SMARCA5O60264 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SMARCA5O60264 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMARCA5O60264 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SMARCA5O60264 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC18.64■□□□□ 0.58
SMARCA5O60264 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCA5O60264 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCA5O60264 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMARCA5O60264 AC005912.2-201ENST00000619492 2400 ntBASIC18.64■□□□□ 0.58
SMARCA5O60264 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.64■□□□□ 0.58
SMARCA5O60264 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.64■□□□□ 0.57
SMARCA5O60264 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCA5O60264 FO681548.1-201ENST00000455617 1132 ntBASIC18.64■□□□□ 0.57
SMARCA5O60264 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 PTP4A1P2-201ENST00000546033 454 ntBASIC18.64■□□□□ 0.57
SMARCA5O60264 AC009486.1-201ENST00000569860 813 ntBASIC18.64■□□□□ 0.57
SMARCA5O60264 GNRHR2-203ENST00000581100 1187 ntBASIC18.64■□□□□ 0.57
SMARCA5O60264 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCA5O60264 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCA5O60264 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.64■□□□□ 0.57
SMARCA5O60264 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMARCA5O60264 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC18.64■□□□□ 0.57
SMARCA5O60264 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SMARCA5O60264 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMARCA5O60264 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMARCA5O60264 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 AP001267.2-201ENST00000532619 2086 ntBASIC18.63■□□□□ 0.57
SMARCA5O60264 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 AL512384.1-201ENST00000406683 331 ntBASIC18.63■□□□□ 0.57
SMARCA5O60264 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 NME2P1-201ENST00000426182 414 ntBASIC18.63■□□□□ 0.57
SMARCA5O60264 BCRP2-202ENST00000447763 634 ntBASIC18.63■□□□□ 0.57
SMARCA5O60264 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SMARCA5O60264 GIMAP3P-201ENST00000495150 836 ntBASIC18.63■□□□□ 0.57
SMARCA5O60264 KRT18P25-201ENST00000508931 1278 ntBASIC18.63■□□□□ 0.57
SMARCA5O60264 BCRP6-201ENST00000510112 632 ntBASIC18.63■□□□□ 0.57
SMARCA5O60264 BCRP7-201ENST00000511549 544 ntBASIC18.63■□□□□ 0.57
SMARCA5O60264 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.63■□□□□ 0.57
SMARCA5O60264 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.63■□□□□ 0.57
SMARCA5O60264 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.63■□□□□ 0.57
SMARCA5O60264 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMARCA5O60264 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.63■□□□□ 0.57
SMARCA5O60264 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMARCA5O60264 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SMARCA5O60264 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.62■□□□□ 0.57
SMARCA5O60264 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMARCA5O60264 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms