Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 COX5BP1-201ENST00000507622 393 ntBASIC15.29■□□□□ 0.04
KDELR3O43731 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.29■□□□□ 0.04
KDELR3O43731 C2orf69P2-201ENST00000562032 1123 ntBASIC15.29■□□□□ 0.04
KDELR3O43731 RN7SL713P-201ENST00000582127 302 ntBASIC15.29■□□□□ 0.04
KDELR3O43731 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.29■□□□□ 0.04
KDELR3O43731 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
KDELR3O43731 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.29■□□□□ 0.04
KDELR3O43731 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDELR3O43731 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDELR3O43731 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDELR3O43731 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.29■□□□□ 0.04
KDELR3O43731 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDELR3O43731 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KDELR3O43731 INE2-201ENST00000630399 1874 ntBASIC15.29■□□□□ 0.04
KDELR3O43731 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.29■□□□□ 0.04
KDELR3O43731 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KDELR3O43731 SALL4P5-201ENST00000419001 1760 ntBASIC15.29■□□□□ 0.04
KDELR3O43731 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
KDELR3O43731 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDELR3O43731 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KDELR3O43731 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KDELR3O43731 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
KDELR3O43731 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KDELR3O43731 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
KDELR3O43731 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 BNIP3P42-201ENST00000454982 569 ntBASIC15.28■□□□□ 0.04
KDELR3O43731 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.28■□□□□ 0.04
KDELR3O43731 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 DUX4L45-201ENST00000566406 1057 ntBASIC15.28■□□□□ 0.04
KDELR3O43731 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.28■□□□□ 0.04
KDELR3O43731 BNIP3P29-201ENST00000598302 571 ntBASIC15.28■□□□□ 0.04
KDELR3O43731 AC011447.5-201ENST00000616168 564 ntBASIC15.28■□□□□ 0.04
KDELR3O43731 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 LINC01101-201ENST00000622953 1884 ntBASIC15.28■□□□□ 0.04
KDELR3O43731 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.28■□□□□ 0.04
KDELR3O43731 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.28■□□□□ 0.04
KDELR3O43731 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.28■□□□□ 0.04
KDELR3O43731 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 AC018442.1-201ENST00000421439 2061 ntBASIC15.28■□□□□ 0.04
KDELR3O43731 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.28■□□□□ 0.04
KDELR3O43731 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KDELR3O43731 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KDELR3O43731 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 AC011840.2-201ENST00000563063 1520 ntBASIC15.27■□□□□ 0.04
KDELR3O43731 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.27■□□□□ 0.04
KDELR3O43731 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.27■□□□□ 0.04
KDELR3O43731 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 TSPY26P-202ENST00000565928 3884 ntBASIC15.27■□□□□ 0.04
KDELR3O43731 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
KDELR3O43731 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.27■□□□□ 0.04
KDELR3O43731 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.27■□□□□ 0.04
KDELR3O43731 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
KDELR3O43731 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.27■□□□□ 0.04
KDELR3O43731 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.27■□□□□ 0.04
KDELR3O43731 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
KDELR3O43731 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KDELR3O43731 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
KDELR3O43731 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KDELR3O43731 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms