Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 RN7SL560P-201ENST00000577943 264 ntBASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 AC008687.7-202ENST00000637404 953 ntBASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 AL109954.1-202ENST00000564051 2148 ntBASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NPIPA3F8WFD2 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 LRRC59-203ENST00000576448 1531 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 NUS1P3-201ENST00000423502 862 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AC114812.1-204ENST00000449669 728 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 PFN1P12-201ENST00000455938 534 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 RPL13AP20-201ENST00000459725 609 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AC004066.1-201ENST00000502488 802 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 MIR6869-201ENST00000619434 62 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AC132938.4-201ENST00000623835 848 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AL138709.1-201ENST00000614840 1693 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 KRT8P44-201ENST00000441609 1350 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 AC104640.1-201ENST00000562617 2109 ntBASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NPIPA3F8WFD2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 AC023024.2-201ENST00000623561 1993 ntBASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NPIPA3F8WFD2 CICP11-201ENST00000434745 2827 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 284.5 ms