Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.41■□□□□ 0.54
RGPD3A6NKT7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RGPD3A6NKT7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RGPD3A6NKT7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.41■□□□□ 0.54
RGPD3A6NKT7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RGPD3A6NKT7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RGPD3A6NKT7 AL365181.1-201ENST00000564032 1828 ntBASIC18.41■□□□□ 0.54
RGPD3A6NKT7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.41■□□□□ 0.54
RGPD3A6NKT7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RGPD3A6NKT7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AL080243.1-201ENST00000423293 1060 ntBASIC18.4■□□□□ 0.54
RGPD3A6NKT7 ASS1P2-201ENST00000439895 1223 ntBASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AC004801.1-201ENST00000549557 360 ntBASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AC105250.1-201ENST00000509378 2057 ntBASIC18.4■□□□□ 0.54
RGPD3A6NKT7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AL121949.3-201ENST00000406684 385 ntBASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AC073210.1-201ENST00000414799 232 ntBASIC18.4■□□□□ 0.54
RGPD3A6NKT7 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 PSME2-217ENST00000615264 874 ntTSL 5 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 PSME2-218ENST00000630027 185 ntTSL 3 BASIC18.4■□□□□ 0.54
RGPD3A6NKT7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.39■□□□□ 0.54
RGPD3A6NKT7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RGPD3A6NKT7 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RGPD3A6NKT7 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RGPD3A6NKT7 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.39■□□□□ 0.54
RGPD3A6NKT7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.39■□□□□ 0.54
RGPD3A6NKT7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RGPD3A6NKT7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 ODCP-201ENST00000459650 1639 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 PCDHB19P-201ENST00000570871 2371 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 OR52M2P-201ENST00000414298 959 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AC108724.1-201ENST00000481669 352 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AC120498.7-201ENST00000562876 330 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AL357143.1-203ENST00000639750 881 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AC092135.3-201ENST00000624151 1846 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AC011676.5-201ENST00000624864 2660 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 AC139712.1-201ENST00000378256 1875 ntBASIC18.39■□□□□ 0.53
RGPD3A6NKT7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RGPD3A6NKT7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC18.38■□□□□ 0.53
RGPD3A6NKT7 AC067931.2-201ENST00000623655 2003 ntBASIC18.38■□□□□ 0.53
RGPD3A6NKT7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.38■□□□□ 0.53
RGPD3A6NKT7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RGPD3A6NKT7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RGPD3A6NKT7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RGPD3A6NKT7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RGPD3A6NKT7 OLA1P2-201ENST00000395519 1264 ntBASIC18.38■□□□□ 0.53
RGPD3A6NKT7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RGPD3A6NKT7 HNRNPA1P25-201ENST00000422644 937 ntBASIC18.38■□□□□ 0.53
RGPD3A6NKT7 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.38■□□□□ 0.53
RGPD3A6NKT7 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms