Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AC007950.2-201ENST00000615045 2347 ntBASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AC005229.1-201ENST00000392885 409 ntBASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 BOLA2P3-201ENST00000404566 256 ntBASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 MIR1909-201ENST00000411312 80 ntBASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AC068587.3-201ENST00000526613 355 ntBASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 MIR6805-201ENST00000615055 62 ntBASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 FP325330.2-201ENST00000624219 5630 ntBASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
LRCOL1A6NCL2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 AL731571.1-201ENST00000617058 5428 ntBASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 ACKR1-201ENST00000368121 1240 ntBASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 MIR658-201ENST00000385210 100 ntBASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 BAATP1-201ENST00000412284 1225 ntBASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 AC012441.1-201ENST00000446669 685 ntBASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 CROCCP4-201ENST00000457096 498 ntBASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 AC093433.1-201ENST00000458048 571 ntBASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 AP001889.1-201ENST00000525414 633 ntBASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.22□□□□□ -0.77
LRCOL1A6NCL2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms