Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PTCH2Q9Y6C5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
PTCH2Q9Y6C5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AL513523.2-202ENST00000427283 2040 ntBASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 FTH1P22-201ENST00000456305 520 ntBASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AL603832.2-201ENST00000566195 2125 ntBASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 AC144522.1-201ENST00000625111 1658 ntBASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCH2Q9Y6C5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 TSPY25P-201ENST00000429463 745 ntBASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 AL157407.1-201ENST00000435784 904 ntBASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 AP000911.2-201ENST00000534330 502 ntBASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 AC027237.1-201ENST00000560942 655 ntBASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 MIR4472-1-201ENST00000584349 80 ntBASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 AC009560.1-201ENST00000620208 434 ntBASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCH2Q9Y6C5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 CYP4F23P-201ENST00000593402 1579 ntBASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.81■□□□□ 0.28
PTCH2Q9Y6C5 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms