Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 AC018665.1-201ENST00000622927 1362 ntBASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 PCDHA3-202ENST00000532566 4594 ntBASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.34■□□□□ 0.05
RAI2Q9Y5P3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
RAI2Q9Y5P3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 EIF3FP3-201ENST00000434851 1086 ntBASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 DUX4L47-201ENST00000566374 394 ntBASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 AL022328.1-201ENST00000610050 478 ntBASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 AC145423.3-201ENST00000615987 467 ntBASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.33■□□□□ 0.04
RAI2Q9Y5P3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 AC055811.4-201ENST00000624039 1754 ntBASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 AC099548.2-209ENST00000480264 625 ntBASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RAI2Q9Y5P3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms