Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.48■□□□□ 0.39
CTDP1Q9Y5B0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 AL360270.3-201ENST00000609118 1348 ntBASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 AC104457.1-201ENST00000401024 814 ntBASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 AC020914.3-201ENST00000594712 304 ntBASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 AC138466.3-201ENST00000619983 221 ntBASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 AC012508.2-201ENST00000567613 1472 ntBASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 AL157414.3-201ENST00000624276 1954 ntBASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 FKBP4P6-201ENST00000457486 1332 ntBASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTDP1Q9Y5B0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 AL365203.3-201ENST00000609742 2057 ntBASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 GHSR-202ENST00000427970 912 ntBASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 POM121L10P-201ENST00000436994 1285 ntBASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 AC004898.1-201ENST00000451057 766 ntBASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 AC073413.1-201ENST00000603927 732 ntBASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTDP1Q9Y5B0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CTDP1Q9Y5B0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CTDP1Q9Y5B0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.38
CTDP1Q9Y5B0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CTDP1Q9Y5B0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms