Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 MIR6074-201ENST00000612054 107 ntBASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
NPC1L1Q9UHC9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 FAM45BP-202ENST00000592932 1624 ntBASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPC1L1Q9UHC9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 KLF2P1-201ENST00000447438 1042 ntBASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 AC015802.1-201ENST00000588104 1449 ntBASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 AC140479.7-201ENST00000636301 2332 ntBASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPC1L1Q9UHC9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPC1L1Q9UHC9 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms