Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 AC105129.2-201ENST00000559536 390 ntBASIC15.45■□□□□ 0.06
EBF1Q9UH73 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 NDUFV2P1-201ENST00000596415 907 ntBASIC15.45■□□□□ 0.06
EBF1Q9UH73 AC016629.1-201ENST00000596579 586 ntBASIC15.45■□□□□ 0.06
EBF1Q9UH73 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 AC244157.2-201ENST00000616239 1006 ntBASIC15.45■□□□□ 0.06
EBF1Q9UH73 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 AL023775.1-201ENST00000454907 1746 ntBASIC15.45■□□□□ 0.06
EBF1Q9UH73 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
EBF1Q9UH73 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
EBF1Q9UH73 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 RN7SL769P-201ENST00000469386 295 ntBASIC15.44■□□□□ 0.06
EBF1Q9UH73 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.44■□□□□ 0.06
EBF1Q9UH73 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 ENPP7P14-201ENST00000621765 1040 ntBASIC15.44■□□□□ 0.06
EBF1Q9UH73 AC138627.1-207ENST00000641560 1006 ntBASIC15.44■□□□□ 0.06
EBF1Q9UH73 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
EBF1Q9UH73 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.44■□□□□ 0.06
EBF1Q9UH73 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.43■□□□□ 0.06
EBF1Q9UH73 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.43■□□□□ 0.06
EBF1Q9UH73 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
EBF1Q9UH73 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.43■□□□□ 0.06
EBF1Q9UH73 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
EBF1Q9UH73 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
EBF1Q9UH73 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
EBF1Q9UH73 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.43■□□□□ 0.06
EBF1Q9UH73 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
EBF1Q9UH73 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.43■□□□□ 0.06
EBF1Q9UH73 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
EBF1Q9UH73 AC139749.1-202ENST00000617529 3139 ntBASIC15.43■□□□□ 0.06
EBF1Q9UH73 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms