Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 AP001063.1-201ENST00000568332 529 ntBASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 CLUHP6-201ENST00000580789 941 ntBASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 PRSS30P-206ENST00000641773 873 ntBASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 AC005089.1-201ENST00000619486 2241 ntBASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 AC139749.1-202ENST00000617529 3139 ntBASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.84■□□□□ 0.13
PPARGC1AQ9UBK2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.83■□□□□ 0.13
PPARGC1AQ9UBK2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PPARGC1AQ9UBK2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.83■□□□□ 0.13
PPARGC1AQ9UBK2 MROH4P-201ENST00000431302 1578 ntBASIC15.83■□□□□ 0.13
PPARGC1AQ9UBK2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PPARGC1AQ9UBK2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PPARGC1AQ9UBK2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PPARGC1AQ9UBK2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 ACTG1P3-201ENST00000431775 1114 ntBASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 RN7SL837P-201ENST00000463010 287 ntBASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 AC005252.2-201ENST00000624630 1141 ntBASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 AC023024.2-201ENST00000623561 1993 ntBASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.83■□□□□ 0.12
PPARGC1AQ9UBK2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 INE1-201ENST00000456273 945 ntBASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AP001582.1-201ENST00000525856 295 ntBASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AC009486.1-201ENST00000569860 813 ntBASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AC012645.4-201ENST00000610691 1061 ntBASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms