Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 EIF4HP1-201ENST00000453115 687 ntBASIC16.94■□□□□ 0.3
COL20A1Q9P218 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 AC022217.1-201ENST00000521069 738 ntBASIC16.94■□□□□ 0.3
COL20A1Q9P218 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 AC100827.2-201ENST00000563214 1194 ntBASIC16.94■□□□□ 0.3
COL20A1Q9P218 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 AL645939.5-201ENST00000606834 243 ntBASIC16.94■□□□□ 0.3
COL20A1Q9P218 BX088702.1-201ENST00000610784 235 ntBASIC16.94■□□□□ 0.3
COL20A1Q9P218 AC138649.2-201ENST00000615886 705 ntBASIC16.94■□□□□ 0.3
COL20A1Q9P218 AC068587.8-201ENST00000641239 219 ntBASIC16.94■□□□□ 0.3
COL20A1Q9P218 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 CYP46A4P-201ENST00000414953 267 ntBASIC16.93■□□□□ 0.3
COL20A1Q9P218 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 SPTLC1P5-201ENST00000450718 252 ntBASIC16.93■□□□□ 0.3
COL20A1Q9P218 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 ALG3P1-201ENST00000508806 1114 ntBASIC16.93■□□□□ 0.3
COL20A1Q9P218 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 NDUFV2P1-201ENST00000596415 907 ntBASIC16.93■□□□□ 0.3
COL20A1Q9P218 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 AC004923.1-202ENST00000642106 209 ntBASIC16.93■□□□□ 0.3
COL20A1Q9P218 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL20A1Q9P218 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 LINC01101-201ENST00000622953 1884 ntBASIC16.93■□□□□ 0.3
COL20A1Q9P218 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL20A1Q9P218 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 VDAC1P1-201ENST00000439229 848 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms