Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MKS1Q9NXB0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 AL139400.1-201ENST00000366220 510 ntBASIC14.93□□□□□ -0.02
MKS1Q9NXB0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 DUX4L47-201ENST00000566374 394 ntBASIC14.93□□□□□ -0.02
MKS1Q9NXB0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MKS1Q9NXB0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 DRD5P1-201ENST00000456605 1438 ntBASIC14.92□□□□□ -0.02
MKS1Q9NXB0 AC011840.2-201ENST00000563063 1520 ntBASIC14.92□□□□□ -0.02
MKS1Q9NXB0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 MIR6074-201ENST00000612054 107 ntBASIC14.92□□□□□ -0.02
MKS1Q9NXB0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.92□□□□□ -0.02
MKS1Q9NXB0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms