Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 AC092474.2-201ENST00000424288 719 ntBASIC13.86□□□□□ -0.19
HMG20AQ9NP66 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 AC140658.5-201ENST00000438532 169 ntBASIC13.86□□□□□ -0.19
HMG20AQ9NP66 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 KRT18P34-201ENST00000488218 1270 ntBASIC13.86□□□□□ -0.19
HMG20AQ9NP66 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 AC034105.1-201ENST00000563488 319 ntBASIC13.86□□□□□ -0.19
HMG20AQ9NP66 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 AC064836.3-201ENST00000607928 673 ntBASIC13.86□□□□□ -0.19
HMG20AQ9NP66 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 AC025580.3-201ENST00000617932 1424 ntBASIC13.86□□□□□ -0.19
HMG20AQ9NP66 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 BCAR1-209ENST00000546196 1340 ntBASIC13.86□□□□□ -0.19
HMG20AQ9NP66 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMG20AQ9NP66 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 AC004877.2-201ENST00000623941 599 ntBASIC13.85□□□□□ -0.19
HMG20AQ9NP66 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HMG20AQ9NP66 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms