Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 LINC00554-201ENST00000564841 3011 ntBASIC17.82■□□□□ 0.44
RNF41Q9H4P4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF41Q9H4P4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.81■□□□□ 0.44
RNF41Q9H4P4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 MIR658-201ENST00000385210 100 ntBASIC17.81■□□□□ 0.44
RNF41Q9H4P4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 TLE1P1-201ENST00000422965 589 ntBASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 COX11-210ENST00000639671 696 ntBASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.81■□□□□ 0.44
RNF41Q9H4P4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 AHCYP2-201ENST00000430630 1300 ntBASIC17.8■□□□□ 0.44
RNF41Q9H4P4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 FAM8A4P-201ENST00000435433 1213 ntBASIC17.8■□□□□ 0.44
RNF41Q9H4P4 KRT223P-202ENST00000449164 1292 ntBASIC17.8■□□□□ 0.44
RNF41Q9H4P4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 AC023310.1-201ENST00000554836 735 ntBASIC17.8■□□□□ 0.44
RNF41Q9H4P4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 AC008687.7-202ENST00000637404 953 ntBASIC17.8■□□□□ 0.44
RNF41Q9H4P4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 AL354989.2-201ENST00000435838 1540 ntBASIC17.8■□□□□ 0.44
RNF41Q9H4P4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 AJ011931.1-201ENST00000618749 2492 ntBASIC17.8■□□□□ 0.44
RNF41Q9H4P4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RNF41Q9H4P4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms