Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RSPO3Q9BXY4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 MSTO2P-201ENST00000314835 1709 ntBASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 AC016397.2-201ENST00000624848 1985 ntBASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 MEP1AP4-201ENST00000423244 1087 ntBASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 NUS1P3-201ENST00000423502 862 ntBASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 AC123567.1-201ENST00000548294 1261 ntBASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 AC093726.1-201ENST00000608064 963 ntBASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 AC090505.1-201ENST00000430515 1834 ntBASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RSPO3Q9BXY4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
RSPO3Q9BXY4 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RSPO3Q9BXY4 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RSPO3Q9BXY4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.83□□□□□ -0.19
RSPO3Q9BXY4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RSPO3Q9BXY4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 INE2-201ENST00000630399 1874 ntBASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RSPO3Q9BXY4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms