Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 BRI3BPP1-201ENST00000594224 787 ntBASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 AC010319.3-201ENST00000597028 470 ntBASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 AC127383.1-201ENST00000444697 1800 ntBASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PCGF1Q9BSM1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 AL133267.1-201ENST00000398220 340 ntBASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 C1QBPP1-201ENST00000400117 770 ntBASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 AC136621.1-201ENST00000624017 2304 ntBASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 AC005840.4-201ENST00000541242 2494 ntBASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 AL109954.1-202ENST00000564051 2148 ntBASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
PCGF1Q9BSM1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms