Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AL162274.1-201ENST00000617191 1098 ntBASIC13.73□□□□□ -0.21
USB1Q9BQ65 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 KRT8P22-201ENST00000562317 1415 ntBASIC13.73□□□□□ -0.21
USB1Q9BQ65 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
USB1Q9BQ65 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.73□□□□□ -0.21
USB1Q9BQ65 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 CICP24-201ENST00000605464 2705 ntBASIC13.72□□□□□ -0.21
USB1Q9BQ65 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 EIF2S2P3-201ENST00000428356 999 ntBASIC13.72□□□□□ -0.21
USB1Q9BQ65 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 INE1-201ENST00000456273 945 ntBASIC13.72□□□□□ -0.21
USB1Q9BQ65 GPR53P-205ENST00000457298 1084 ntBASIC13.72□□□□□ -0.21
USB1Q9BQ65 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
USB1Q9BQ65 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.72□□□□□ -0.21
USB1Q9BQ65 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.71□□□□□ -0.21
USB1Q9BQ65 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.71□□□□□ -0.21
USB1Q9BQ65 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.71□□□□□ -0.21
USB1Q9BQ65 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
USB1Q9BQ65 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
USB1Q9BQ65 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
USB1Q9BQ65 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
USB1Q9BQ65 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
USB1Q9BQ65 AL607033.1-201ENST00000623900 1599 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms