Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 CNN2P8-201ENST00000421872 913 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 AC245100.3-201ENST00000441281 285 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 KRT223P-202ENST00000449164 1292 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 AC026434.2-201ENST00000506094 1078 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 AL359881.2-201ENST00000602973 570 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 RHOXF1P1-202ENST00000635473 501 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 COX11-210ENST00000639671 696 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 DBET-201ENST00000630918 3363 ntBASIC15.61■□□□□ 0.09
RPRD1AQ96P16 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RPRD1AQ96P16 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 ZBED1P1-201ENST00000502364 1930 ntBASIC15.6■□□□□ 0.09
RPRD1AQ96P16 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 C8orf49-201ENST00000525043 1968 ntBASIC15.6■□□□□ 0.09
RPRD1AQ96P16 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AGAP7P-201ENST00000582299 2062 ntBASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AGAP14-201ENST00000624701 2060 ntBASIC15.6■□□□□ 0.09
RPRD1AQ96P16 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AC078819.1-201ENST00000547454 765 ntBASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AC012085.1-201ENST00000548270 765 ntBASIC15.6■□□□□ 0.09
RPRD1AQ96P16 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RPRD1AQ96P16 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RPRD1AQ96P16 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms