Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 AC018892.3-201ENST00000623986 2499 ntBASIC17.72■□□□□ 0.43
TRIM47Q96LD4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 TPM3P8-201ENST00000330554 643 ntBASIC17.72■□□□□ 0.43
TRIM47Q96LD4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 RNU1-114P-201ENST00000365297 166 ntBASIC17.72■□□□□ 0.43
TRIM47Q96LD4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 KLF2P2-201ENST00000416807 1039 ntBASIC17.72■□□□□ 0.43
TRIM47Q96LD4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 RN7SL48P-201ENST00000579283 293 ntBASIC17.72■□□□□ 0.43
TRIM47Q96LD4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.72■□□□□ 0.43
TRIM47Q96LD4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRIM47Q96LD4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 AC134698.3-201ENST00000523880 214 ntBASIC17.71■□□□□ 0.43
TRIM47Q96LD4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 AL353726.2-201ENST00000623259 884 ntBASIC17.71■□□□□ 0.43
TRIM47Q96LD4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.71■□□□□ 0.43
TRIM47Q96LD4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.71■□□□□ 0.42
TRIM47Q96LD4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
TRIM47Q96LD4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 AC092127.1-201ENST00000567093 3455 ntBASIC17.7■□□□□ 0.42
TRIM47Q96LD4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 AC079178.1-201ENST00000420915 656 ntBASIC17.7■□□□□ 0.42
TRIM47Q96LD4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 SERPINA13P-202ENST00000478994 924 ntBASIC17.7■□□□□ 0.42
TRIM47Q96LD4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 FGFR3P5-201ENST00000564496 886 ntBASIC17.7■□□□□ 0.42
TRIM47Q96LD4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRIM47Q96LD4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms