Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHAMP1Q96JM3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
CHAMP1Q96JM3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 HLA-K-203ENST00000430151 1046 ntBASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.58■□□□□ 0.4
CHAMP1Q96JM3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 CNN2P11-201ENST00000429351 262 ntBASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 BCRP1-201ENST00000444246 691 ntBASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 SPDYE18-201ENST00000510091 1050 ntBASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHAMP1Q96JM3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 AC069262.1-201ENST00000539058 672 ntBASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.56■□□□□ 0.4
CHAMP1Q96JM3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms