Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.7■□□□□ 0.1
IFT43Q96FT9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AC023024.2-201ENST00000623561 1993 ntBASIC15.69■□□□□ 0.1
IFT43Q96FT9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AC007389.4-201ENST00000454674 793 ntBASIC15.69■□□□□ 0.1
IFT43Q96FT9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 AC017083.2-201ENST00000608069 979 ntBASIC15.69■□□□□ 0.1
IFT43Q96FT9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IFT43Q96FT9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
IFT43Q96FT9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 CICP11-201ENST00000434745 2827 ntBASIC15.68■□□□□ 0.1
IFT43Q96FT9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 AC079781.5-202ENST00000641784 3743 ntBASIC15.68■□□□□ 0.1
IFT43Q96FT9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 CLK3P2-201ENST00000427566 1453 ntBASIC15.68■□□□□ 0.1
IFT43Q96FT9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 TTTY23B-201ENST00000442790 549 ntBASIC15.68■□□□□ 0.1
IFT43Q96FT9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 AL391069.4-201ENST00000609583 481 ntBASIC15.68■□□□□ 0.1
IFT43Q96FT9 MIR8072-201ENST00000614241 80 ntBASIC15.68■□□□□ 0.1
IFT43Q96FT9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.68■□□□□ 0.1
IFT43Q96FT9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 LINC00552-201ENST00000625151 2579 ntBASIC15.68■□□□□ 0.1
IFT43Q96FT9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IFT43Q96FT9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IFT43Q96FT9 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT43Q96FT9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
IFT43Q96FT9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
IFT43Q96FT9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
IFT43Q96FT9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
IFT43Q96FT9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IFT43Q96FT9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IFT43Q96FT9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms