Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 CHMP1AP1-201ENST00000445563 662 ntBASIC16.38■□□□□ 0.21
PGBD4Q96DM1 AC091804.1-201ENST00000486888 567 ntBASIC16.38■□□□□ 0.21
PGBD4Q96DM1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AL157414.3-201ENST00000624276 1954 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 CALR4P-201ENST00000431943 946 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AC126915.1-201ENST00000522847 1038 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AP003171.2-201ENST00000528208 925 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AC020914.3-201ENST00000594712 304 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AC004466.1-201ENST00000599515 1080 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 FKBP4P6-201ENST00000457486 1332 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 AC087481.3-201ENST00000602886 1894 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 REXO1L4P-201ENST00000605109 1937 ntBASIC16.37■□□□□ 0.21
PGBD4Q96DM1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PGBD4Q96DM1 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 AC138028.6-201ENST00000616106 1482 ntBASIC16.36■□□□□ 0.21
PGBD4Q96DM1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.36■□□□□ 0.21
PGBD4Q96DM1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.36■□□□□ 0.21
PGBD4Q96DM1 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.36■□□□□ 0.21
PGBD4Q96DM1 HIST2H2BB-201ENST00000449108 381 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms