Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC138649.4-201ENST00000612222 287 ntBASIC13.66□□□□□ -0.22
PTP4A1Q93096 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 AC092580.3-201ENST00000430932 139 ntBASIC13.65□□□□□ -0.22
PTP4A1Q93096 AC241585.1-201ENST00000433527 519 ntBASIC13.65□□□□□ -0.22
PTP4A1Q93096 RN7SL618P-201ENST00000477850 296 ntBASIC13.65□□□□□ -0.22
PTP4A1Q93096 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 AC106028.4-201ENST00000614509 607 ntBASIC13.65□□□□□ -0.22
PTP4A1Q93096 AL590560.3-201ENST00000623350 461 ntBASIC13.65□□□□□ -0.22
PTP4A1Q93096 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
PTP4A1Q93096 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PTP4A1Q93096 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
PTP4A1Q93096 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.65□□□□□ -0.23
PTP4A1Q93096 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AC152010.1-201ENST00000415779 2006 ntBASIC13.64□□□□□ -0.23
PTP4A1Q93096 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
PTP4A1Q93096 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.64□□□□□ -0.23
PTP4A1Q93096 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms