Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.09■□□□□ 0.17
DDX1Q92499 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.09■□□□□ 0.17
DDX1Q92499 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.09■□□□□ 0.17
DDX1Q92499 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
DDX1Q92499 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.09■□□□□ 0.17
DDX1Q92499 AC022616.1-201ENST00000518688 554 ntBASIC16.09■□□□□ 0.17
DDX1Q92499 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.09■□□□□ 0.17
DDX1Q92499 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.09■□□□□ 0.17
DDX1Q92499 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.09■□□□□ 0.17
DDX1Q92499 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 AC244093.1-201ENST00000610837 814 ntBASIC16.09■□□□□ 0.17
DDX1Q92499 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 AC097359.2-201ENST00000604992 2389 ntBASIC16.09■□□□□ 0.17
DDX1Q92499 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 AC026748.1-201ENST00000624349 3251 ntBASIC16.09■□□□□ 0.17
DDX1Q92499 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DDX1Q92499 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.09■□□□□ 0.17
DDX1Q92499 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
DDX1Q92499 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DDX1Q92499 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DDX1Q92499 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.08■□□□□ 0.17
DDX1Q92499 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DDX1Q92499 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DDX1Q92499 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
DDX1Q92499 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
DDX1Q92499 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
DDX1Q92499 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
DDX1Q92499 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 ACTBP8-201ENST00000403258 1108 ntBASIC16.08■□□□□ 0.16
DDX1Q92499 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.08■□□□□ 0.16
DDX1Q92499 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
DDX1Q92499 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.08■□□□□ 0.16
DDX1Q92499 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.08■□□□□ 0.16
DDX1Q92499 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 AL583810.1-201ENST00000553344 1045 ntBASIC16.08■□□□□ 0.16
DDX1Q92499 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.08■□□□□ 0.16
DDX1Q92499 AP001063.1-201ENST00000568332 529 ntBASIC16.08■□□□□ 0.16
DDX1Q92499 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.08■□□□□ 0.16
DDX1Q92499 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 AC068418.2-201ENST00000577309 3703 ntBASIC16.08■□□□□ 0.16
DDX1Q92499 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.08■□□□□ 0.16
DDX1Q92499 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.08■□□□□ 0.16
DDX1Q92499 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
DDX1Q92499 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 MIR1908-201ENST00000410394 80 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.07■□□□□ 0.16
DDX1Q92499 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.07■□□□□ 0.16
DDX1Q92499 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms