Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.91□□□□□ -0.5
MBD3L1Q8WWY6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 Z82170.1-201ENST00000625081 3192 ntBASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 CES1P1-201ENST00000421606 1704 ntBASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 AC023141.13-201ENST00000604991 943 ntBASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MBD3L1Q8WWY6 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
MBD3L1Q8WWY6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
MBD3L1Q8WWY6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.9□□□□□ -0.51
MBD3L1Q8WWY6 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.9□□□□□ -0.51
MBD3L1Q8WWY6 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
MBD3L1Q8WWY6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
MBD3L1Q8WWY6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.9□□□□□ -0.51
MBD3L1Q8WWY6 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.9□□□□□ -0.51
MBD3L1Q8WWY6 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms