Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
RTN4IP1Q8WWV3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RTN4IP1Q8WWV3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
RTN4IP1Q8WWV3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 TEX28P1-201ENST00000613479 1221 ntBASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 TEX28P2-201ENST00000617764 1221 ntBASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AL033527.5-202ENST00000641632 1098 ntBASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 BEND3P1-201ENST00000421591 1944 ntBASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTN4IP1Q8WWV3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AC027369.6-201ENST00000525520 931 ntBASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AL158211.3-201ENST00000607385 239 ntBASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTN4IP1Q8WWV3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms