Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC148Q8NFR7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 AL137783.1-201ENST00000623494 1896 ntBASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 MYO15B-237ENST00000642007 4893 ntBASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 GAPDHP21-201ENST00000450301 1010 ntBASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 USP32P1-208ENST00000506594 1164 ntBASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 AC233724.13-201ENST00000598383 410 ntBASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 AC097376.2-205ENST00000610159 5334 ntBASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC148Q8NFR7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 AC005229.1-201ENST00000392885 409 ntBASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 AP001889.1-201ENST00000525414 633 ntBASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC148Q8NFR7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 AC055811.4-201ENST00000624039 1754 ntBASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC148Q8NFR7 AL009178.2-201ENST00000597278 2719 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms