Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 AL109936.8-201ENST00000641772 604 ntBASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 AC092135.3-201ENST00000624151 1846 ntBASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.68□□□□□ -0.22
BBS1Q8NFJ9 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AC079781.5-202ENST00000641784 3743 ntBASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 SPDYE7P-202ENST00000420373 878 ntBASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 DNAJB3-201ENST00000446806 729 ntBASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AC074044.1-201ENST00000609673 707 ntBASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 SPDYE12P-201ENST00000618416 771 ntBASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.67□□□□□ -0.22
BBS1Q8NFJ9 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 AL360270.3-201ENST00000609118 1348 ntBASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
BBS1Q8NFJ9 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms