Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 TRIM80P-201ENST00000455685 2848 ntBASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 AC138969.3-201ENST00000546612 1459 ntBASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 AC138932.2-201ENST00000548268 1459 ntBASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 AC126755.4-201ENST00000549796 1459 ntBASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CROCCP3Q8IVE0 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 AL031133.1-201ENST00000406807 723 ntBASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 FAM185BP-201ENST00000443595 716 ntBASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 AL022323.5-201ENST00000624101 2059 ntBASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CROCCP3Q8IVE0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 BX324167.2-201ENST00000623717 3316 ntBASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CROCCP3Q8IVE0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 MRPL20P1-201ENST00000400819 433 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 DUSP5P1-201ENST00000441325 1139 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 TCAM1P-207ENST00000485295 1537 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 FAM86EP-206ENST00000510506 987 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 AC136632.2-201ENST00000512891 861 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 AC109635.5-201ENST00000533593 962 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 SART3-203ENST00000546611 1184 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 MIR3180-1-201ENST00000580374 94 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 MIR3180-3-201ENST00000584616 94 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 AL691432.1-201ENST00000596308 1422 ntBASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CROCCP3Q8IVE0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms