Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 TOMM22P5-201ENST00000416399 439 ntBASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 TPM4P1-201ENST00000436100 807 ntBASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 SPDYE14P-201ENST00000442619 822 ntBASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC093520.2-201ENST00000561830 333 ntBASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC040169.1-201ENST00000565382 521 ntBASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 LINC01115-203ENST00000606068 577 ntBASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC087386.2-201ENST00000623212 4637 ntBASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRTM1Q86UE6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 AL080243.2-201ENST00000418783 582 ntBASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 ALG1L5P-201ENST00000482043 771 ntBASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 AL033527.5-202ENST00000641632 1098 ntBASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRTM1Q86UE6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRRTM1Q86UE6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms