Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 FAU-201ENST00000279259 461 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 RPL35P9-201ENST00000446059 350 ntBASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AC226150.1-201ENST00000544259 466 ntBASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AL118522.1-201ENST00000611368 560 ntBASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AC004466.2-201ENST00000614749 516 ntBASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 PRORSD1P-202ENST00000563365 2154 ntBASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AC020931.1-201ENST00000589622 1346 ntBASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 RN7SKP230-201ENST00000365642 335 ntBASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AC093826.1-201ENST00000508655 993 ntBASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 AC254633.1-201ENST00000606790 345 ntBASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HIST2H2BCQ6DN03 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST2H2BCQ6DN03 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
HIST2H2BCQ6DN03 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST2H2BCQ6DN03 AC025183.3-201ENST00000623526 1482 ntBASIC12.72□□□□□ -0.37
HIST2H2BCQ6DN03 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST2H2BCQ6DN03 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST2H2BCQ6DN03 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms