Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 ALG3P1-201ENST00000508806 1114 ntBASIC13.25□□□□□ -0.29
FREM1Q5H8C1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 AC003102.2-201ENST00000589195 1469 ntBASIC13.25□□□□□ -0.29
FREM1Q5H8C1 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 YBX1P6-201ENST00000442962 1002 ntBASIC13.25□□□□□ -0.29
FREM1Q5H8C1 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
FREM1Q5H8C1 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 HOMER2P2-201ENST00000451621 847 ntBASIC13.24□□□□□ -0.29
FREM1Q5H8C1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 RN7SL48P-201ENST00000579283 293 ntBASIC13.24□□□□□ -0.29
FREM1Q5H8C1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 AC020910.5-201ENST00000623668 1865 ntBASIC13.24□□□□□ -0.29
FREM1Q5H8C1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 BTBD6P1-201ENST00000412176 1267 ntBASIC13.24□□□□□ -0.29
FREM1Q5H8C1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.24□□□□□ -0.29
FREM1Q5H8C1 TLE1P1-201ENST00000422965 589 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms