Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.63■□□□□ 0.73
COL16A1Q07092 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.63■□□□□ 0.73
COL16A1Q07092 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL16A1Q07092 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COL16A1Q07092 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 JPT2-203ENST00000382711 894 ntTSL 4 BASIC19.62■□□□□ 0.73
COL16A1Q07092 AP000354.1-201ENST00000396982 456 ntBASIC19.62■□□□□ 0.73
COL16A1Q07092 DKKL1P1-201ENST00000400550 698 ntBASIC19.62■□□□□ 0.73
COL16A1Q07092 AHCYP3-201ENST00000420053 1279 ntBASIC19.62■□□□□ 0.73
COL16A1Q07092 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC19.62■□□□□ 0.73
COL16A1Q07092 AC025186.1-201ENST00000478174 870 ntBASIC19.62■□□□□ 0.73
COL16A1Q07092 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC19.62■□□□□ 0.73
COL16A1Q07092 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC19.62■□□□□ 0.73
COL16A1Q07092 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC19.62■□□□□ 0.73
COL16A1Q07092 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC19.62■□□□□ 0.73
COL16A1Q07092 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 URB1-AS1-201ENST00000534991 831 ntBASIC19.62■□□□□ 0.73
COL16A1Q07092 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 SNORD3B-1-201ENST00000577988 758 ntBASIC19.62■□□□□ 0.73
COL16A1Q07092 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC19.62■□□□□ 0.73
COL16A1Q07092 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.62■□□□□ 0.73
COL16A1Q07092 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL16A1Q07092 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL16A1Q07092 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC19.62■□□□□ 0.73
COL16A1Q07092 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC19.62■□□□□ 0.73
COL16A1Q07092 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC19.62■□□□□ 0.73
COL16A1Q07092 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19.62■□□□□ 0.73
COL16A1Q07092 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC19.62■□□□□ 0.73
COL16A1Q07092 AC006986.1-201ENST00000612764 241 ntBASIC19.62■□□□□ 0.73
COL16A1Q07092 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL16A1Q07092 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.61■□□□□ 0.73
COL16A1Q07092 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.61■□□□□ 0.73
COL16A1Q07092 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 AC106820.2-201ENST00000563775 3264 ntBASIC19.61■□□□□ 0.73
COL16A1Q07092 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC19.61■□□□□ 0.73
COL16A1Q07092 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.61■□□□□ 0.73
COL16A1Q07092 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL16A1Q07092 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COL16A1Q07092 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC19.61■□□□□ 0.73
COL16A1Q07092 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
COL16A1Q07092 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.61■□□□□ 0.73
COL16A1Q07092 MSANTD2P1-201ENST00000445341 1368 ntBASIC19.61■□□□□ 0.73
COL16A1Q07092 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC19.61■□□□□ 0.73
COL16A1Q07092 RN7SL128P-201ENST00000467883 305 ntBASIC19.61■□□□□ 0.73
COL16A1Q07092 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 NDUFB10P1-201ENST00000567319 521 ntBASIC19.61■□□□□ 0.73
COL16A1Q07092 PCDHB19P-201ENST00000570871 2371 ntBASIC19.61■□□□□ 0.73
COL16A1Q07092 AC138761.6-201ENST00000583997 1423 ntBASIC19.61■□□□□ 0.73
COL16A1Q07092 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC19.61■□□□□ 0.73
COL16A1Q07092 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
COL16A1Q07092 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL16A1Q07092 AC005274.1-201ENST00000623460 802 ntBASIC19.61■□□□□ 0.73
COL16A1Q07092 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL16A1Q07092 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.6■□□□□ 0.73
COL16A1Q07092 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL16A1Q07092 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.6■□□□□ 0.73
COL16A1Q07092 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC19.6■□□□□ 0.73
COL16A1Q07092 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.6■□□□□ 0.73
COL16A1Q07092 ASS1P2-201ENST00000439895 1223 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms