Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAE1P78406 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAE1P78406 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAE1P78406 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RAE1P78406 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.33□□□□□ -0.11
RAE1P78406 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.33□□□□□ -0.11
RAE1P78406 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RAE1P78406 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RAE1P78406 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.33□□□□□ -0.12
RAE1P78406 ACTBP8-201ENST00000403258 1108 ntBASIC14.33□□□□□ -0.12
RAE1P78406 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
RAE1P78406 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.33□□□□□ -0.12
RAE1P78406 TPT1P11-201ENST00000458482 498 ntBASIC14.33□□□□□ -0.12
RAE1P78406 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.33□□□□□ -0.12
RAE1P78406 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.33□□□□□ -0.12
RAE1P78406 AC190387.1-201ENST00000551683 408 ntBASIC14.33□□□□□ -0.12
RAE1P78406 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.33□□□□□ -0.12
RAE1P78406 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.33□□□□□ -0.12
RAE1P78406 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.33□□□□□ -0.12
RAE1P78406 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RAE1P78406 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.33□□□□□ -0.12
RAE1P78406 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAE1P78406 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAE1P78406 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.33□□□□□ -0.12
RAE1P78406 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.33□□□□□ -0.12
RAE1P78406 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.32□□□□□ -0.12
RAE1P78406 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
RAE1P78406 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.32□□□□□ -0.12
RAE1P78406 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.32□□□□□ -0.12
RAE1P78406 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAE1P78406 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RAE1P78406 ACKR1-201ENST00000368121 1240 ntBASIC14.32□□□□□ -0.12
RAE1P78406 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 PIN1P1-201ENST00000412108 996 ntBASIC14.32□□□□□ -0.12
RAE1P78406 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.32□□□□□ -0.12
RAE1P78406 AC093433.1-201ENST00000458048 571 ntBASIC14.32□□□□□ -0.12
RAE1P78406 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAE1P78406 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.32□□□□□ -0.12
RAE1P78406 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 AP001063.1-201ENST00000568332 529 ntBASIC14.32□□□□□ -0.12
RAE1P78406 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.32□□□□□ -0.12
RAE1P78406 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.32□□□□□ -0.12
RAE1P78406 AL603764.1-201ENST00000636452 321 ntBASIC14.32□□□□□ -0.12
RAE1P78406 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAE1P78406 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.32□□□□□ -0.12
RAE1P78406 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.32□□□□□ -0.12
RAE1P78406 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RAE1P78406 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RAE1P78406 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.32□□□□□ -0.12
RAE1P78406 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RAE1P78406 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.32□□□□□ -0.12
RAE1P78406 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms