Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SCARNA21-201ENST00000517026 139 ntBASIC17.07■□□□□ 0.32
CCNA1P78396 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
CCNA1P78396 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.07■□□□□ 0.32
CCNA1P78396 MIR6720-201ENST00000611664 98 ntBASIC17.07■□□□□ 0.32
CCNA1P78396 COX6A1P2-201ENST00000620597 330 ntBASIC17.07■□□□□ 0.32
CCNA1P78396 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CCNA1P78396 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.07■□□□□ 0.32
CCNA1P78396 AP005117.1-202ENST00000581724 1908 ntBASIC17.07■□□□□ 0.32
CCNA1P78396 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.07■□□□□ 0.32
CCNA1P78396 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.07■□□□□ 0.32
CCNA1P78396 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCNA1P78396 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCNA1P78396 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 AL139384.1-201ENST00000612143 3047 ntBASIC17.06■□□□□ 0.32
CCNA1P78396 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.06■□□□□ 0.32
CCNA1P78396 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.06■□□□□ 0.32
CCNA1P78396 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.06■□□□□ 0.32
CCNA1P78396 AC073150.1-201ENST00000450406 1084 ntBASIC17.06■□□□□ 0.32
CCNA1P78396 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 IQSEC3P1-201ENST00000538799 536 ntBASIC17.06■□□□□ 0.32
CCNA1P78396 MIR3147-201ENST00000577811 66 ntBASIC17.06■□□□□ 0.32
CCNA1P78396 AC005962.1-201ENST00000584100 773 ntBASIC17.06■□□□□ 0.32
CCNA1P78396 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.06■□□□□ 0.32
CCNA1P78396 Z98259.2-201ENST00000641583 609 ntBASIC17.06■□□□□ 0.32
CCNA1P78396 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.06■□□□□ 0.32
CCNA1P78396 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCNA1P78396 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCNA1P78396 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CCNA1P78396 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.06■□□□□ 0.32
CCNA1P78396 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 TBC1D3J-201ENST00000620719 1426 ntBASIC17.05■□□□□ 0.32
CCNA1P78396 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCNA1P78396 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNA1P78396 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCNA1P78396 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCNA1P78396 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNA1P78396 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCNA1P78396 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.05■□□□□ 0.32
CCNA1P78396 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNA1P78396 AL035414.1-201ENST00000451327 857 ntBASIC17.05■□□□□ 0.32
CCNA1P78396 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CCNA1P78396 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCNA1P78396 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.05■□□□□ 0.32
CCNA1P78396 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNA1P78396 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.05■□□□□ 0.32
CCNA1P78396 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.05■□□□□ 0.32
CCNA1P78396 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CCNA1P78396 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCNA1P78396 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCNA1P78396 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCNA1P78396 AC018635.2-201ENST00000608625 364 ntBASIC17.05■□□□□ 0.32
CCNA1P78396 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC17.05■□□□□ 0.32
CCNA1P78396 AC027601.3-201ENST00000622907 509 ntBASIC17.05■□□□□ 0.32
CCNA1P78396 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.05■□□□□ 0.32
CCNA1P78396 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms